> ## Documentation Index
> Fetch the complete documentation index at: https://docs.catalog.igvf.org/llms.txt
> Use this file to discover all available pages before exploring further.

# Field Lineage

> Portal file columns through adapters to Catalog API fields

# Field Lineage

This page documents how fields flow from **portal files** (with [file format specifications](https://data.igvf.org)) through [KG loading adapters](https://github.com/IGVF-DACC/igvf-catalog/tree/dev/data/adapters) into **ArangoDB** and the **REST API**.

For automated deep traces, use the `trace` tool in [igvf-catalog-dev-agents](https://github.com/IGVF/igvf-catalog-dev-agents).

## AFGR\_caqtl\_adapter.py

| Arango / API field   | Adapter expression | Notes |
| -------------------- | ------------------ | ----- |
| `name`               | `_id`              |       |
| `source`             | `(computed)`       |       |
| `method`             | `(computed)`       |       |
| `label`              | `'caQTL'`          |       |
| `p_value`            | `pvalue`           |       |
| `biosample_term`     | `(computed)`       |       |
| `biological_context` | `(computed)`       |       |
| `class`              | `(computed)`       |       |

## AFGR\_eqtl\_adapter.py

| Arango / API field   | Adapter expression          | Notes |
| -------------------- | --------------------------- | ----- |
| `biological_context` | `(computed)`                |       |
| `p_value`            | `(computed)`                |       |
| `effect_size`        | `(computed)`                |       |
| `class`              | `(computed)`                |       |
| `method`             | `(computed)`                |       |
| `label`              | `'eQTL'`                    |       |
| `source`             | `(computed)`                |       |
| `name`               | `'modulates expression of'` |       |
| `biosample_term`     | `(computed)`                |       |

## AFGR\_sqtl\_adapter.py

| Arango / API field   | Adapter expression        | Notes |
| -------------------- | ------------------------- | ----- |
| `biological_context` | `(computed)`              |       |
| `p_value`            | `pvalue`                  |       |
| `effect_size`        | `(computed)`              |       |
| `class`              | `(computed)`              |       |
| `method`             | `(computed)`              |       |
| `label`              | `'spliceQTL'`             |       |
| `source`             | `(computed)`              |       |
| `name`               | `'modulates splicing of'` |       |
| `biosample_term`     | `(computed)`              |       |

## BlueSTARR\_variants\_biosamples\_adapter.py

**Referenced files:** [ENCFF420VPZ](https://www.encodeproject.org/ENCFF420VPZ/), [IGVFFI0818FMCC](https://data.igvf.org/IGVFFI0818FMCC), [IGVFFI1663LKVQ](https://data.igvf.org/IGVFFI1663LKVQ), [IGVFFI3351LASN](https://data.igvf.org/IGVFFI3351LASN), [IGVFFI5288RAAV](https://data.igvf.org/IGVFFI5288RAAV)

| Arango / API field   | Adapter expression                   | Notes |
| -------------------- | ------------------------------------ | ----- |
| `class`              | `(computed)`                         |       |
| `label`              | `(computed)`                         |       |
| `method`             | `(computed)`                         |       |
| `biological_context` | `(computed)`                         |       |
| `biosample_term`     | `(computed)`                         |       |
| `name`               | `'modulates regulatory activity of'` |       |
| `source`             | `(computed)`                         |       |

## DUAL\_IPA\_coding\_variant\_scores\_adapter.py

**Referenced files:** [IGVFFI6224HZMG](https://data.igvf.org/IGVFFI6224HZMG)

| Arango / API field   | Adapter expression | Notes |
| -------------------- | ------------------ | ----- |
| `source`             | `(computed)`       |       |
| `name`               | `(computed)`       |       |
| `method`             | `(computed)`       |       |
| `class`              | `(computed)`       |       |
| `label`              | `(computed)`       |       |
| `biological_context` | `(computed)`       |       |
| `biosample_term`     | `(computed)`       |       |

## ESM\_coding\_variants\_adapter.py

**Referenced files:** [IGVFFI8105TNNO](https://data.igvf.org/IGVFFI8105TNNO)

| Arango / API field   | Adapter expression | Notes |
| -------------------- | ------------------ | ----- |
| `name`               | `'codes for'`      |       |
| `source`             | `(computed)`       |       |
| `label`              | `(computed)`       |       |
| `method`             | `(computed)`       |       |
| `class`              | `(computed)`       |       |
| `biosample_term`     | `(computed)`       |       |
| `biological_context` | `(computed)`       |       |

## Mutpred2\_coding\_variants\_adapter.py

**Referenced files:** [IGVFFI6893ZOAA](https://data.igvf.org/IGVFFI6893ZOAA)

| Arango / API field   | Adapter expression | Notes |
| -------------------- | ------------------ | ----- |
| `name`               | `'codes for'`      |       |
| `label`              | `'codes for'`      |       |
| `source`             | `(computed)`       |       |
| `method`             | `(computed)`       |       |
| `class`              | `(computed)`       |       |
| `biological_context` | `(computed)`       |       |
| `biosample_term`     | `(computed)`       |       |

## SEM\_motif\_adapter.py

**Referenced files:** [ENCFF001UVU](https://www.encodeproject.org/ENCFF001UVU/), [ENCFF242PUG](https://www.encodeproject.org/ENCFF242PUG/), [IGVFFI4892QCRR](https://data.igvf.org/IGVFFI4892QCRR), [IGVFFI8823UTCQ](https://data.igvf.org/IGVFFI8823UTCQ)

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `motif_key`        |       |
| `source`           | `'IGVF'`           |       |

## SEM\_prediction\_adapter.py

**Referenced files:** [ENCFF001UVU](https://www.encodeproject.org/ENCFF001UVU/), [ENCFF242PUG](https://www.encodeproject.org/ENCFF242PUG/), [IGVFFI4892QCRR](https://data.igvf.org/IGVFFI4892QCRR), [IGVFFI6807FCZT](https://data.igvf.org/IGVFFI6807FCZT), [IGVFFI6923RISY](https://data.igvf.org/IGVFFI6923RISY)

| Arango / API field   | Adapter expression                    | Notes |
| -------------------- | ------------------------------------- | ----- |
| `label`              | `'predicted allele-specific binding'` |       |
| `method`             | `(computed)`                          |       |
| `class`              | `(computed)`                          |       |
| `biosample_term`     | `(computed)`                          |       |
| `biological_context` | `(computed)`                          |       |
| `name`               | `'modulates binding of'`              |       |
| `source`             | `'IGVF'`                              |       |

## SGE\_variant\_phenotype\_adapter.py

**Referenced files:** [IGVFFI9974PZRX](https://data.igvf.org/IGVFFI9974PZRX)

| Arango / API field   | Adapter expression | Notes |
| -------------------- | ------------------ | ----- |
| `source`             | `(computed)`       |       |
| `method`             | `(computed)`       |       |
| `class`              | `(computed)`       |       |
| `label`              | `(computed)`       |       |
| `biosample_term`     | `(computed)`       |       |
| `biological_context` | `(computed)`       |       |
| `name`               | `(computed)`       |       |

## STARR\_seq\_adapter.py

| Arango / API field   | Adapter expression          | Notes |
| -------------------- | --------------------------- | ----- |
| `source`             | `(computed)`                |       |
| `name`               | `'modulates expression in'` |       |
| `label`              | `(computed)`                |       |
| `method`             | `(computed)`                |       |
| `class`              | `(computed)`                |       |
| `biological_context` | `(computed)`                |       |
| `biosample_term`     | `(computed)`                |       |

## VAMP\_coding\_variant\_scores\_adapter.py

**Referenced files:** [IGVFFI0629IIQU](https://data.igvf.org/IGVFFI0629IIQU), [IGVFFI8987JRZH](https://data.igvf.org/IGVFFI8987JRZH)

| Arango / API field   | Adapter expression      | Notes |
| -------------------- | ----------------------- | ----- |
| `source`             | `(computed)`            |       |
| `name`               | `(computed)`            |       |
| `method`             | `file_fileset_obj[...]` |       |
| `class`              | `file_fileset_obj[...]` |       |
| `label`              | `(computed)`            |       |
| `biological_context` | `(computed)`            |       |
| `biosample_term`     | `(computed)`            |       |

## Variant\_EFFECTS\_variant\_gene\_adapter.py

**Referenced files:** [IGVFFI9602ILPC](https://data.igvf.org/IGVFFI9602ILPC)

| Arango / API field   | Adapter expression                    | Notes |
| -------------------- | ------------------------------------- | ----- |
| `source`             | `(computed)`                          |       |
| `effect_size`        | `(computed)`                          |       |
| `class`              | `'observed data'`                     |       |
| `label`              | `'variant effect on gene expression'` |       |
| `name`               | `'modulates expression of'`           |       |
| `method`             | `'Variant-EFFECTS'`                   |       |
| `biological_context` | `(computed)`                          |       |
| `biosample_term`     | `(computed)`                          |       |

## adastra\_asb\_adapter.py

| Arango / API field   | Adapter expression          | Notes |
| -------------------- | --------------------------- | ----- |
| `biological_context` | `cell_gtrd_name`            |       |
| `biosample_term`     | `(computed)`                |       |
| `source`             | `(computed)`                |       |
| `label`              | `'allele-specific binding'` |       |
| `method`             | `(computed)`                |       |
| `class`              | `(computed)`                |       |
| `name`               | `'modulates binding of'`    |       |

## biogrid\_gene\_gene\_adapter.py

| Arango / API field | Adapter expression  | Notes |
| ------------------ | ------------------- | ----- |
| `source`           | `row[...]`          |       |
| `name`             | `'interacts with'`  |       |
| `method`           | `collection_method` |       |
| `label`            | `(computed)`        |       |
| `class`            | `(computed)`        |       |

## cV2F\_variant\_phenotype\_adapter.py

**Referenced files:** [IGVFFI1931RMNE](https://data.igvf.org/IGVFFI1931RMNE), [IGVFFI4594QVDO](https://data.igvf.org/IGVFFI4594QVDO)

| Arango / API field   | Adapter expression  | Notes |
| -------------------- | ------------------- | ----- |
| `score`              | `(computed)`        |       |
| `source`             | `(computed)`        |       |
| `name`               | `'associated with'` |       |
| `biological_context` | `(computed)`        |       |
| `biosample_term`     | `(computed)`        |       |
| `method`             | `(computed)`        |       |
| `class`              | `(computed)`        |       |
| `label`              | `(computed)`        |       |

## ccre\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `row[...]`         |       |
| `method`           | `(computed)`       |       |
| `source`           | `'ENCODE'`         |       |

## cellosaurus\_ontology\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `(computed)`       |       |
| `source`           | `(computed)`       |       |

## clingen\_variant\_disease\_adapter.py

| Arango / API field | Adapter expression  | Notes |
| ------------------ | ------------------- | ----- |
| `gene_id`          | `(computed)`        |       |
| `name`             | `'associated with'` |       |
| `source`           | `(computed)`        |       |

## coxpresdb\_adapter.py

**Referenced files:** [IGVFFI3321YNBP](https://data.igvf.org/IGVFFI3321YNBP)

| Arango / API field | Adapter expression   | Notes |
| ------------------ | -------------------- | ----- |
| `source`           | `(computed)`         |       |
| `name`             | `'coexpressed with'` |       |
| `class`            | `(computed)`         |       |
| `method`           | `(computed)`         |       |
| `label`            | `(computed)`         |       |

## dbNSFP\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `source`           | `'dbNSFP 5.1a'`    |       |
| `name`             | `'codes for'`      |       |

## depmap\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `source`           | `(computed)`       |       |
| `name`             | `'essential in'`   |       |

## ebi\_complex\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `complex_row[...]` |       |
| `source`           | `(computed)`       |       |

## encode\_E2G\_CRISPR\_adapter.py

**Referenced files:** [ENCFF968BZL](https://www.encodeproject.org/ENCFF968BZL/)

| Arango / API field   | Adapter expression | Notes |
| -------------------- | ------------------ | ----- |
| `name`               | `_id`              |       |
| `method`             | `(computed)`       |       |
| `source`             | `(computed)`       |       |
| `score`              | `(computed)`       |       |
| `p_value`            | `(computed)`       |       |
| `class`              | `(computed)`       |       |
| `label`              | `(computed)`       |       |
| `biological_context` | `(computed)`       |       |
| `biosample_term`     | `(computed)`       |       |

## encode\_caqtl\_adapter.py

| Arango / API field   | Adapter expression | Notes |
| -------------------- | ------------------ | ----- |
| `label`              | `'caQTL'`          |       |
| `method`             | `(computed)`       |       |
| `class`              | `(computed)`       |       |
| `source`             | `'ENCODE'`         |       |
| `biological_context` | `(computed)`       |       |
| `biosample_term`     | `(computed)`       |       |
| `name`               | `(computed)`       |       |

## encode\_element\_gene\_adapter.py

**Referenced files:** [ENCFF006FTZ](https://www.encodeproject.org/ENCFF006FTZ/), [ENCFF034GOH](https://www.encodeproject.org/ENCFF034GOH/), [ENCFF036LSB](https://www.encodeproject.org/ENCFF036LSB/), [ENCFF073KUI](https://www.encodeproject.org/ENCFF073KUI/), [ENCFF074MTS](https://www.encodeproject.org/ENCFF074MTS/), [ENCFF079SJR](https://www.encodeproject.org/ENCFF079SJR/), [ENCFF138UMI](https://www.encodeproject.org/ENCFF138UMI/), [ENCFF176YAF](https://www.encodeproject.org/ENCFF176YAF/), [ENCFF197HRR](https://www.encodeproject.org/ENCFF197HRR/), [ENCFF201SDO](https://www.encodeproject.org/ENCFF201SDO/), [ENCFF202FBA](https://www.encodeproject.org/ENCFF202FBA/), [ENCFF213WPV](https://www.encodeproject.org/ENCFF213WPV/)

| Arango / API field   | Adapter expression  | Notes |
| -------------------- | ------------------- | ----- |
| `method`             | `file_fileset[...]` |       |
| `label`              | `(computed)`        |       |
| `class`              | `file_fileset[...]` |       |
| `score`              | `(computed)`        |       |
| `source`             | `'ENCODE'`          |       |
| `biological_context` | `(computed)`        |       |
| `biosample_term`     | `(computed)`        |       |
| `name`               | `'regulates'`       |       |

## eqtl\_catalog\_adapter.py

| Arango / API field   | Adapter expression   | Notes |
| -------------------- | -------------------- | ----- |
| `biosample_term`     | `biosample_term`     |       |
| `biological_context` | `biological_context` |       |
| `label`              | `label`              |       |
| `class`              | `(computed)`         |       |
| `method`             | `(computed)`         |       |
| `source`             | `(computed)`         |       |
| `name`               | `name`               |       |
| `gene_id`            | `gene_id`            |       |
| `p_value`            | `p_value`            |       |
| `effect_size`        | `(computed)`         |       |

## favor\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `source`           | `'FAVOR'`          |       |

## file\_fileset\_adapter.py

**Referenced files:** [ENCFF167FJQ](https://www.encodeproject.org/ENCFF167FJQ/), [ENCFF420VPZ](https://www.encodeproject.org/ENCFF420VPZ/), [ENCFF968BZL](https://www.encodeproject.org/ENCFF968BZL/)

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `file_object[...]` |       |
| `method`           | `method`           |       |
| `class`            | `class_type`       |       |
| `source`           | `(computed)`       |       |

## gaf\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `source`           | `'Gene Ontology'`  |       |

## gencc\_diseases\_genes\_adapter.py

| Arango / API field | Adapter expression  | Notes |
| ------------------ | ------------------- | ----- |
| `name`             | `'associated_with'` |       |
| `source`           | `(computed)`        |       |

## gencode\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `info[...]`        |       |
| `source`           | `'GENCODE'`        |       |

## gencode\_gene\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `gene_id`          | `gene_id`          |       |
| `name`             | `info[...]`        |       |
| `source`           | `'GENCODE'`        |       |

## gencode\_gene\_structure\_adapter.py

| Arango / API field | Adapter expression   | Notes |
| ------------------ | -------------------- | ----- |
| `name`             | `(computed)`         |       |
| `gene_id`          | `gene_id_no_version` |       |
| `source`           | `(computed)`         |       |

## gencode\_protein\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `(computed)`       |       |
| `source`           | `'GENCODE'`        |       |

## gvatdb\_asb\_adapter.py

| Arango / API field | Adapter expression          | Notes |
| ------------------ | --------------------------- | ----- |
| `p_value`          | `pvalue`                    |       |
| `log10pvalue`      | `log10pvalue`               |       |
| `source`           | `(computed)`                |       |
| `label`            | `'allele-specific binding'` |       |
| `method`           | `(computed)`                |       |
| `class`            | `(computed)`                |       |
| `name`             | `'modulates binding of'`    |       |

## gwas\_adapter.py

**Referenced files:** [IGVFFI1309WDQG](https://data.igvf.org/IGVFFI1309WDQG)

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `study_id`         |       |
| `source`           | `(computed)`       |       |
| `p_value`          | `pvalue`           |       |
| `class`            | `(computed)`       |       |
| `method`           | `(computed)`       |       |
| `label`            | `(computed)`       |       |

## human\_mouse\_element\_adapter.py

**Referenced files:** [ENCFF078OEX](https://www.encodeproject.org/ENCFF078OEX/)

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `source`           | `32`               |       |
| `name`             | `_id_human`        |       |
| `method`           | `'integrative'`    |       |

## igvf\_E2G\_CRISPR\_adapter.py

| Arango / API field   | Adapter expression          | Notes |
| -------------------- | --------------------------- | ----- |
| `source`             | `(computed)`                |       |
| `label`              | `(computed)`                |       |
| `class`              | `file_fileset[...]`         |       |
| `name`               | `'modulates expression of'` |       |
| `method`             | `method`                    |       |
| `biological_context` | `(computed)`                |       |
| `biosample_term`     | `(computed)`                |       |

## mgi\_human\_mouse\_ortholog\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `'homologous to'`  |       |
| `source`           | `'MGI'`            |       |

## motif\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `_key`             |       |
| `source`           | `(computed)`       |       |

## mouse\_genomes\_project\_adapter.py

| Arango / API field | Adapter expression        | Notes |
| ------------------ | ------------------------- | ----- |
| `name`             | `spdi`                    |       |
| `source`           | `'MOUSE GENOMES PROJECT'` |       |

## mpra\_adapter.py

**Referenced files:** [ENCFF802FUV](https://www.encodeproject.org/ENCFF802FUV/), [IGVFFI1323RCIE](https://data.igvf.org/IGVFFI1323RCIE), [IGVFFI1436TRIH](https://data.igvf.org/IGVFFI1436TRIH), [IGVFFI4914OUJH](https://data.igvf.org/IGVFFI4914OUJH), [IGVFFI8207IHFY](https://data.igvf.org/IGVFFI8207IHFY)

| Arango / API field   | Adapter expression | Notes |
| -------------------- | ------------------ | ----- |
| `name`               | `element_name`     |       |
| `method`             | `(computed)`       |       |
| `source`             | `(computed)`       |       |
| `class`              | `(computed)`       |       |
| `label`              | `(computed)`       |       |
| `biological_context` | `(computed)`       |       |
| `biosample_term`     | `(computed)`       |       |

## oncotree\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `node[...]`        |       |
| `source`           | `(computed)`       |       |

## ontologies\_adapter.py

**Referenced files:** [IGVFFI0402TNDW](https://data.igvf.org/IGVFFI0402TNDW), [IGVFFI0719VRZV](https://data.igvf.org/IGVFFI0719VRZV), [IGVFFI1298JRGV](https://data.igvf.org/IGVFFI1298JRGV), [IGVFFI2369NSDT](https://data.igvf.org/IGVFFI2369NSDT), [IGVFFI4219OZTA](https://data.igvf.org/IGVFFI4219OZTA), [IGVFFI6182DQZM](https://data.igvf.org/IGVFFI6182DQZM), [IGVFFI7115PAJX](https://data.igvf.org/IGVFFI7115PAJX), [IGVFFI7985BGYI](https://data.igvf.org/IGVFFI7985BGYI), [IGVFFI8306RHIV](https://data.igvf.org/IGVFFI8306RHIV), [IGVFFI8953HXRQ](https://data.igvf.org/IGVFFI8953HXRQ), [IGVFFI9789TIWM](https://data.igvf.org/IGVFFI9789TIWM)

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `(computed)`       |       |
| `source`           | `(computed)`       |       |

## orphanet\_disease\_adapter.py

| Arango / API field | Adapter expression  | Notes |
| ------------------ | ------------------- | ----- |
| `name`             | `'associated_with'` |       |
| `source`           | `(computed)`        |       |

## pQTL\_adapter.py

| Arango / API field   | Adapter expression            | Notes |
| -------------------- | ----------------------------- | ----- |
| `label`              | `'pQTL'`                      |       |
| `class`              | `(computed)`                  |       |
| `method`             | `(computed)`                  |       |
| `log10pvalue`        | `(computed)`                  |       |
| `biological_context` | `(computed)`                  |       |
| `biosample_term`     | `(computed)`                  |       |
| `source`             | `(computed)`                  |       |
| `name`               | `'associated with levels of'` |       |

## pharmgkb\_drug\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `drug_name`        |       |
| `source`           | `(computed)`       |       |

## proteins\_interaction\_adapter.py

**Referenced files:** [IGVFFI1165YVBA](https://data.igvf.org/IGVFFI1165YVBA), [IGVFFI4317VDGK](https://data.igvf.org/IGVFFI4317VDGK)

| Arango / API field | Adapter expression            | Notes |
| ------------------ | ----------------------------- | ----- |
| `source`           | `source`                      |       |
| `name`             | `'physically interacts with'` |       |
| `method`           | `collection_method`           |       |
| `label`            | `detection_method`            |       |
| `class`            | `(computed)`                  |       |

## reactome\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `source`           | `'Reactome'`       |       |
| `name`             | `'belongs to'`     |       |

## reactome\_pathway\_adapter.py

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `name`             | `name`             |       |
| `source`           | `'Reactome'`       |       |

## scE2G\_adapter.py

**Referenced files:** [IGVFFI3412RLDF](https://data.igvf.org/IGVFFI3412RLDF)

| Arango / API field | Adapter expression | Notes |
| ------------------ | ------------------ | ----- |
| `score`            | `score`            |       |
| `label`            | `(computed)`       |       |
| `method`           | `method`           |       |
| `class`            | `collection_class` |       |
| `source`           | `(computed)`       |       |
| `name`             | `'regulates'`      |       |

## topld\_adapter.py

| Arango / API field | Adapter expression        | Notes |
| ------------------ | ------------------------- | ----- |
| `r2`               | `(computed)`              |       |
| `d_prime`          | `(computed)`              |       |
| `label`            | `'linkage disequilibrum'` |       |
| `name`             | `'correlated with'`       |       |
| `source`           | `'TopLD'`                 |       |
| `variant_id`       | `(computed)`              |       |