Variants Summary
curl --request GET \
--url https://catalog-api-dev.demo.igvf.org/api/variants/summaryimport requests
url = "https://catalog-api-dev.demo.igvf.org/api/variants/summary"
response = requests.get(url)
print(response.text)const options = {method: 'GET'};
fetch('https://catalog-api-dev.demo.igvf.org/api/variants/summary', options)
.then(res => res.json())
.then(res => console.log(res))
.catch(err => console.error(err));{
"summary": {
"rsid": [
"<string>"
],
"varinfo": "<string>",
"spdi": "<string>",
"hgvs": "<string>",
"ca_id": "<string>",
"ref": "<string>",
"alt": "<string>"
},
"nearest_genes": {
"nearestCodingGene": {
"id": "<string>",
"start": 123,
"end": 123,
"distance": 123,
"gene_name": "<string>"
},
"nearestGene": {
"id": "<string>",
"start": 123,
"end": 123,
"distance": 123,
"gene_name": "<string>"
}
},
"allele_frequencies_gnomad": "<unknown>",
"cadd_scores": {
"raw": 123,
"phread": 123
}
}{
"message": "<string>",
"code": "<string>",
"issues": [
{
"message": "<string>"
}
]
}API Reference
Variants Summary
Retrieve genetic variants summary.
Example: variant_id = NC_000020.11:3658947:A:G,
spdi = NC_000020.11:3658947:A:G,
hgvs = NC_000020.11:g.3658948A>G.
ca_id = CA739473472
Variants Summary
curl --request GET \
--url https://catalog-api-dev.demo.igvf.org/api/variants/summaryimport requests
url = "https://catalog-api-dev.demo.igvf.org/api/variants/summary"
response = requests.get(url)
print(response.text)const options = {method: 'GET'};
fetch('https://catalog-api-dev.demo.igvf.org/api/variants/summary', options)
.then(res => res.json())
.then(res => console.log(res))
.catch(err => console.error(err));{
"summary": {
"rsid": [
"<string>"
],
"varinfo": "<string>",
"spdi": "<string>",
"hgvs": "<string>",
"ca_id": "<string>",
"ref": "<string>",
"alt": "<string>"
},
"nearest_genes": {
"nearestCodingGene": {
"id": "<string>",
"start": 123,
"end": 123,
"distance": 123,
"gene_name": "<string>"
},
"nearestGene": {
"id": "<string>",
"start": 123,
"end": 123,
"distance": 123,
"gene_name": "<string>"
}
},
"allele_frequencies_gnomad": "<unknown>",
"cadd_scores": {
"raw": 123,
"phread": 123
}
}{
"message": "<string>",
"code": "<string>",
"issues": [
{
"message": "<string>"
}
]
}Query Parameters
Available options:
Mus musculus, Homo sapiens